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FUNCTION: SYS.BLASTP_MATCH
Source
1 FUNCTION blastp_match (
2 query_sequence IN CLOB,
3 seqdb_cursor blast_cur.seqdbcur_t,
4 subsequence_from IN INTEGER DEFAULT 1,
5 subsequence_to IN INTEGER DEFAULT -1,
6 filter_low_complexity IN INTEGER DEFAULT 0,
7 mask_lower_case IN INTEGER DEFAULT 0,
8 sub_matrix IN STRING DEFAULT 'BLOSUM62',
9 expect_value IN NUMBER DEFAULT 10,
10 open_gap_cost IN INTEGER DEFAULT 11,
11 extend_gap_cost IN INTEGER DEFAULT 1,
12 word_size IN INTEGER DEFAULT 3,
13 x_dropoff IN INTEGER DEFAULT 15,
14 final_x_dropoff IN INTEGER DEFAULT 25
15 )
16 RETURN dmbmos AUTHID CURRENT_user
17 PARALLEL_ENABLE(PARTITION seqdb_cursor BY ANY)
18 PIPELINED USING dmbmpimp;