FUNCTION: SYS.BLASTP_ALIGN

Source

1 FUNCTION blastp_align (
2   query_sequence        IN CLOB,
3   seqdb_cursor             blast_cur.seqdbcur_t,
4   subsequence_from      IN INTEGER   DEFAULT 1,
5   subsequence_to        IN INTEGER   DEFAULT -1,
6   filter_low_complexity IN INTEGER   DEFAULT 0,
7   mask_lower_case       IN INTEGER   DEFAULT 0,
8   sub_matrix            IN STRING    DEFAULT 'BLOSUM62',
9   expect_value          IN NUMBER    DEFAULT 10,
10   open_gap_cost         IN INTEGER   DEFAULT 11,
11   extend_gap_cost       IN INTEGER   DEFAULT 1,
12   word_size             IN INTEGER   DEFAULT 3,
13   x_dropoff             IN INTEGER   DEFAULT 15,
14   final_x_dropoff       IN INTEGER   DEFAULT 25
15 )
16 RETURN dmbaos AUTHID CURRENT_USER
17 PARALLEL_ENABLE(PARTITION seqdb_cursor BY ANY)
18 PIPELINED USING dmbapimp;